Welcome to
College of Veterinary Science
(Assam Agricultural University, Khanapara, Guwahati - 781022)
Bioinformatics Infrastructure Facility
(Sponsored by Department of Biotechnology, Govt. of India)
| Submission for Year | Hardware Type | Number | Available for Computing | Year of Purchase | No. of CPU | RAM (in GB/TB) | Hard Disk (GB/TB) |
|---|---|---|---|---|---|---|---|
| Since Inception - 2018 | Precision Workstation | 1 | Yes | 2014 | 12 | 32GB | 2TB |
| Since Inception - 2018 | Servers | 7 | No | 2008 | 4 | 4GB | 512GB |
| Since Inception - 2018 | Desktop | 25 | Yes | 2008 | 4 | 2GB | 256GB |
| 2018 - 2019 | Server | 1 | Yes | 2019 | 40 | 128GB | 10TB |
| Submission for Year | Software Name | Licence (from) | Licence (to) | Website URL | Status |
|---|---|---|---|---|---|
| Since Inception - 2018 | Discovery Studio 3.5 | 2013-04-01 | 2113-03-31 | http://www.3dsbiovia.com/ | Active |
| Since Inception - 2018 | Geneious Pro | 2010-04-01 | 2017-04-30 | https://www.geneious.com/ | Active |
| Since Inception - 2018 | Exome Horizon | 2011-02-01 | 2017-04-30 | http://mgl.com/life_sciences_exome_horizon.html | Expired |
| Since Inception - 2018 | CLC Bio Combined Workbench | 2009-03-31 | 2109-03-30 | https://www.qiagenbioinformatics.com/ | Active |
| Submission for Year | Type of Collaboration | Name of Collaborative Institute | Name of Your Country | Remarks (Details of Collaborators) |
|---|---|---|---|---|
| Since Inception - 2018 | National | Gauhati University | India | BIF, Department of Zoology, Gauhati University initiated a collaborative research in 2017 and it is still going on. |
| Since Inception - 2018 | National | Institute of Advanced Study in Science and Technology | India | BIF, IASST, Guwahati initiated a collaborative research in 2016 and it is still going on. |
| Since Inception - 2018 | International | Deparment of Microbiology & Molecular Genetics, University of California, Irvine, USA | India | The collaboration with Dr. Michael Mcclelland of Deparment of Microbiology & Molecular Genetics,University of California, Irvine, USA, was initiated during DBT Overseas Associateship from 2010 onwards. |
| Submission for Year | Type | Name | Highest Qualification | Trainer(with affiliations) | From | To |
|---|---|---|---|---|---|---|
| Since Inception - 2018 | Studentship | Kanak Chakraborty | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2014-02-18 | 2014-08-17 |
| Since Inception - 2018 | Traineeship | Kanak Chakraborty | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2014-12-17 | 2015-01-10 |
| Since Inception - 2018 | Traineeship | Minakshi Das | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2012-12-10 | 2013-06-09 |
| Since Inception - 2018 | Studentship | Niharika Sharma | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2013-01-01 | 2013-06-30 |
| Since Inception - 2018 | Traineeship | Priyanka Dey | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2014-12-24 | 2015-06-23 |
| Since Inception - 2018 | Studentship | Naireet Saikia | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2014-11-28 | 2015-05-27 |
| Since Inception - 2018 | Studentship | Nimai Charan Mahanandia | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2017-01-25 | 2017-07-24 |
| Since Inception - 2018 | Traineeship | Nimai Charan Mahanandia | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2017-11-01 | 2018-04-19 |
| Since Inception - 2018 | Traineeship | Samprity Baruah | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2009-02-23 | 2009-03-31 |
| Since Inception - 2018 | Traineeship | Prakash Chandra Naik | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2010-03-17 | 2010-09-16 |
| Since Inception - 2018 | Traineeship | Pratap Kumar Parida | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2010-02-20 | 2010-08-19 |
| Since Inception - 2018 | Traineeship | Prakash Chandra Naik | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2010-12-29 | 2011-02-28 |
| Since Inception - 2018 | Traineeship | Panchamita Basumatary | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2014-02-17 | 2014-05-06 |
| Since Inception - 2018 | Traineeship | Parthasarathi Goswami | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2015-04-01 | 2016-03-31 |
| Since Inception - 2018 | Studentship | Pratap Kumar Parida | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2009-02-27 | 2009-08-26 |
| Since Inception - 2018 | Studentship | Pompi Sharma | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2009-02-25 | 2009-08-24 |
| Since Inception - 2018 | Traineeship | Richa Roshni | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2018-12-24 | 2019-06-23 |
| Since Inception - 2018 | Traineeship | Bhanita Rahang | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2018-12-24 | 2019-06-23 |
| Since Inception - 2018 | Traineeship | Homen Phukan | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2017-01-27 | 2017-02-24 |
| Since Inception - 2018 | Traineeship | Indushree Saikia | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2011-03-15 | 2011-09-14 |
| Since Inception - 2018 | Traineeship | Dr. Safeeda Sultana Begum | Masters of Veterinary Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2011-04-13 | 2011-05-24 |
| Since Inception - 2018 | Traineeship | Amit Jayaswal | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2014-09-08 | 2014-11-30 |
| Since Inception - 2018 | Studentship | Mr. P. Kalita | Masters of Science | Dr. Probodh Borah, BIF, College of Veterinary Science | 2011-11-03 | 2011-31-08 |
| Authors | Title | Journal | Volume | Pages | DOI | Year |
|---|---|---|---|---|---|---|
| Nabajyoti Goswami, Md. Iftikar Hussain, Probodh Borah | Molecular dynamics approach to probe the antigenicity of PagN - an outer membrane protein of Salmonella Typhi | Journal of Biomolecular Structures and Dynamics | 36 | 16 | 2018 | |
| Probodh Borah, Steffen Porwollik, Prerak Desai, Prakash Nayak, Partha Pratim Borah, Pui Cheng, Michael McClelland | A simplified multiplex PCR-based typing method for common Salmonella enterica serovars supported by online server-based detection system | Indian Journal of Medical Research | 146 | 9 | 2017 | |
| Kanak Chakraborty, Nabajyoti Goswami, Probodh Borah | Molecular Docking and Dynamics Studies for discovery of potent drug candidate among compounds of Lepidium sativum for Clostridium perfringens Enterotoxin | Journal of Science | 1 | 16 | 2015 | |
| Sarkar, M. And Borah, P | A Comprehensive Database of Biotechnology and Bioinformatics Resources of North East India | International Journal of Information Studies | 9 | 78-83 | 2017 | |
| Buragohain, L.; Borah, P.; Goswami N. and Dutta, R | In silico characterization of Mx2 protein of Buffalo (Bubalus bubalis) | Buffalo Bulletin | 38 | 629-647 | 2019 | |
| Mahanta, S.; Chowdhury, P.; Gogoi, N.; Goswami, N.; Borah, D.; Kumar, R.; Chetia, D.; Borah, P.; Buragohain, A.K. and Gogoi, B | Potential anti-viral activity of approved repurposed drug against main protease of SARSCoV-2: an in silico based approach | Journal of Biomolecular Structure and Dynamic | 10.1080/07391102.2020.1768902 | 2020 | ||
| Dutta, R.; Buragohain, L. and Borah, P | Analysis of codon usage of Severe Acute Respiratory Syndrome Corona Virus 2 (SARS-CoV-2) and its adaptability in dog | Virus Research | https://doi.org/10.1016/j.virusres.2020.198113 | 2020 | ||
| Goswami, A.; Goswami, N.; Bhattacharya, A.; Borah, P. and Devi, D | Composition and in silico structural analysis of fibroin from liquid silk of non-mulberry silkworm Antheraea assamensis | International Journal of Biological Macromolecules | https://doi.org/10.1016/j.ijbiomac.2020.08.232 | 2020 |
| Submission for Year | Title of the Conference | Conference Type | Presentation Type | Reference | From | To |
|---|---|---|---|---|---|---|
| Since Inception - 2018 | East Zonal Indian Pharmacological Society Conference | National | Talk | Goswami, N.; Hussain, I. and Borah, P. (2012). An In Silico Approach to Determine A Mode of DNA Topoisomerase Poisoning by DNA Gyrase Inhibitory Protein (GyrI) in Escherichia coli. Proceedings of East Zonal Indian Pharmacological Society Conference, held at Guwahati, Assam from 3-4 November, 2012 | 2012-11-03 | 2012-11-04 |
| Since Inception - 2018 | <National Conference on Contemporary Bioinformatics Research in India | National | Talk | Goswami, N.; Hussain, I.; Gupta, S.; Borah, P. and Lynn, A.M. (2013). Bacterial Protein Toxins: Molecular Modeling Approaches to Understand Structure and Activity Relationship. Paper presented in National Conference on Contemporary Bioinformatics Research in India held at Silchar, Assam on 10th November, 2013. | 2013-11-10 | 2013-11-10 |
| Since Inception - 2018 | <National Symposium on One Health: Harnessing Biotechnology for Addressing Veterinary and Biomedical Concerns on Food Safety, Zoonoses and Environmental Sustainability | National | Talk | Hussain, I.; Goswami, N. and Borah, P. (2014). Molecular Modeling of Claudin 4 and its Binding Modes with Claudin Binding Domain of Clostridium perfringens Enterotoxin. Paper presented in National Symposium on One Health: Harnessing Biotechnology for Addressing Veterinary and Biomedical Concerns on Food Safety, Zoonoses and Environmental Sustainability, held at Guwahati, Assam from 4-5 February, 2014. | 2014-02-04 | 2014-02-05 |
| Since Inception - 2018 | <3rd International Conference on Proteomics & Bioinformatics | International | Poster | Dutta, R.; Goswami, N.; Kalita, D. and Borah, P. (2013). In silico prediction of GDF9 encoded protein in goat. J. Proteomics Bioinform. 6:7. | 2013-07-15 | 2013-07-17 |